mProX™ Human FCGR3B Stable Cell Line
- Product Category:
- Membrane Protein Stable Cell Lines
- Subcategory:
- Fc Receptor Cell Lines
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Published Data
Fig.1 GPI-B7 expressed on CHO cells offers T-cell costimulation.
CHO CD16B and CHO GPI-B7 cell lines were exposed to irradiation (8000r ads) and subsequently cultured with either the control mAb X63, anti-mouse B7, or anti-human B7 antibodies. Following coating with these antibodies, the cells were introduced into the experimental setup with a T cell to CHO cell ratio of 8:1, all while PMA was maintained at a concentration of 1ng/ml.
Ref: McHugh, Rebecca S., et al. "Construction, purification, and functional incorporation on tumor cells of glycolipid-anchored human B7-1 (CD80)." Proceedings of the National Academy of Sciences 92.17 (1995): 8059-8063.
Pubmed: 7544014
DOI: 10.1073/pnas.92.17.8059
Research Highlights
Zhao, Lun. et al. "Construction of Prognostic Model and miRNA-mRNA Regulatory Network for Lung Squamous Cell Carcinoma." Alternative therapies in health and medicine, 2023.
The purpose of this paper was to construct a prognostic model, miRNA-mRNA regulatory network, and protein-protein interaction (PPI) network for lung squamous cell carcinoma (LUSC) using data from the cancer genome atlas (TCGA) database. The expression matrix for 19962 mRNA transcripts (502 LUSC and 51 normal control samples) and 2205 miRNA transcripts (478 LUSC and 45 normal control samples) was downloaded and sorted. A total of 389 differentially expressed miRNAs (DE-miRNAs) were identified, with 305 being upregulated and 84 down-regulated. Using Cox regression analysis, 7 prognosis-related DE-miRNAs (PDE-miRNAs) were identified, and a prognostic model consisting of three PDE-miRNAs (hsa-miR-4746-5p, hsa-miR-556-3p, and hsa-miR-489-3p) was optimized. This model accurately predicted the grouping and prognosis of LUSC patients, as confirmed by Cox regression analysis, independent prognostic analysis, and survival curves. A miRNA-mRNA regulatory network was constructed, showing the regulatory relationship between PDE-miRNAs and targeted mRNAs. Additionally, a PPI network was created, highlighting the interaction among targeted mRNAs. The results of this study provide insights into the molecular pathogenesis of LUSC and can aid in early clinical diagnosis and treatment.
Zhao, Lun. et al. "Construction of Prognostic Model and miRNA-mRNA Regulatory Network for Lung Squamous Cell Carcinoma." Alternative therapies in health and medicine, 2023.
Pubmed:
37856813
DOI:
No
Pajuste, Fanny-Dhelia; Re, Maido. "GeneToCN: an alignment-free method for gene copy number estimation directly from next-generation sequencing reads." Scientific reports, 2023.
A novel computational approach called GeneToCN has been developed to analyze genomes, specifically focusing on segmental copy number variations encompassing entire genes, some of which exhibit multiallelic patterns. GeneToCN assesses gene-specific k-mer frequencies in FASTQ files, enabling precise gene copy number inference. Validation of this method involved amy1, amy2a, and amy2b genes using ddPCR data, revealing a robust correlation (R = 0.99) between GeneToCN predictions and experimental results. Additional testing on FCGR3 genes highlighted its superior performance for FCGR3A compared to other methods but decreased accuracy for FCGR3B. Furthermore, GeneToCN demonstrated consistency across different sequencing technologies, including Illumina, PacBio, and Oxford Nanopore, in predicting copy numbers for SMN, NPY4R, and LPA Kringle IV-2 domain genes. These findings align with previous research and indicate its potential applicability across diverse sequencing platforms.
Pajuste, Fanny-Dhelia; Re, Maido. "GeneToCN: an alignment-free method for gene copy number estimation directly from next-generation sequencing reads." Scientific reports, 2023.
Pubmed:
37853040
DOI:
10.1038/s41598-023-44636-z